1. Experiments
  2. ChIP-seq
  3. Homo sapiens
  4. Panc1

Experiment summary for ENCSR000BPK

doi:10.17989/ENCSR000BPK

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
REST
Biosample summary
Homo sapiens Panc1
Biosample Type
cell line
Replication type
isogenic
Description
REST ChIP-seq protocol v041610.1 on human PANC-1
Nucleic acid type
DNA
Fragmentation methods
see document
Controls

Attribution

ENCODE2 project
Lab
Richard Myers, HAIB
Award
U54HG004576 (Richard Myers, HAIB)
Project
ENCODE
Date submitted
January 23, 2012
Date released
February 29, 2012
Annotation (gkmsvm-model)
Annotation (physical modeling)
Annotation (BPNet-model)
Submitter comment
The data quality is too poor for peak analysis for hg19. Not enough peaks can be called. The GRCh38 data should also be used with caution.
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag RegulomeDB_2_2

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
11Homo sapiens Panc1 cell lineENCBS425ENCENCAB000AJKENCLB559JEG
21Homo sapiens Panc1 cell lineENCBS425ENCENCAB000AJKENCLB559JEH

Files

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Output type
Replicates

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