Experiment summary for ENCSR000BJC
doi:10.17989/ENCSR000BJC
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- NR3C1
- Biosample summary
- Homo sapiens Ishikawa treated with 100 nM dexamethasone (agonist) for 1 hour
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- NR3C1 ChIP-seq (protocol v041610.2) on ECC-1 treated with dexamethasone at 100 nM. Note- This experiment previously referred to its biosample as ECC-1, however it has been found that all currently available ECC-1 are actually Ishikawa cells.
- Treatments
- 100 nM dexamethasone (CHEBI:41879) for 1 hour
- Nucleic acid type
- DNA
- Fragmentation methods
- see document
- Platform
- Illumina Genome Analyzer IIx
- Controls
Attribution
ENCODE2 project
- Lab
- Richard Myers, HAIB
- Award
- U54HG004576 (Richard Myers, HAIB)
- Project
- ENCODE
- External resources
- References
- Date submitted
- July 18, 2011
- Date released
- July 18, 2011
- Annotation (gkmsvm-model)
- Annotation (BPNet-model)
- Tags
- Factorbook
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
|---|---|---|---|---|---|
| 2 | 1 | Homo sapiens Ishikawa cell line treated with 100 nM dexamethasone (agonist) for 1 hour | ENCBS896YZO | ENCAB000AHB | ENCLB559JQA |
| 1 | 1 | Homo sapiens Ishikawa cell line treated with 100 nM dexamethasone (agonist) for 1 hour | ENCBS896YZO | ENCAB000AHB | ENCLB559JPZ |