Experiment summary for ENCSR000AQJ

doi:10.17989/ENCSR000AQJ

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
SAP30
Biosample summary
Homo sapiens K562
Biosample Type
cell line
Replication type
isogenic
Description
ChIP-seq on human K562 SAP30
Nucleic acid type
DNA
Library starting quantity
27.72ng
Size range
200-600
Fragmentation methods
see document [2-1]see document [1-1]sonication (generic) [3-1]
Controls

Attribution

ENCODE2 project
Lab
Bradley Bernstein, Broad
Award
U54HG004570 (Bradley Bernstein, Broad)
Project
ENCODE
Aliases
bradley-bernstein:Project Element 1021
Date submitted
March 6, 2012
Date released
March 6, 2012
Annotation (gkmsvm-model)
Submitter comment
As of February 28, 2017, new mapping and peak calling is required due to duplicated files.
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag RegulomeDB_2_2

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
21Homo sapiens K562 cell lineENCBS639AAAENCAB000AKOENCLB695AUO
11Homo sapiens K562 cell lineENCBS639AAAENCAB000AKOENCLB695AUN
31Homo sapiens K562 cell lineENCBS979ZKWENCAB000AKOENCLB755WDT