v117 released!
May 28, 2021 —
Announcing v117 release of the ENCODE portal, highlighted by the following updates:
- Released beta version of RNAget feature
- Added facets to ChIP-seq Matrix page and implemented other UI updates
- Added dataset filtering facet to Cart page
- Added file download feature to Series pages
- Shifted inherited audits of Experiments to use only the default analysis
- Added ENCYCLOPEDIAv6 internal tag
- Removed “single cell” biosample classification
- Added new enums to Software schema for software_type and used_by
- Modified Functional Characterization Experiment schema to embed elements references metadata
- Updated Software schema to add additional facets
- Updated Functional Characterization Experiment search with additional facets and updated result titles
- Added new calculated properties crispr_screen_readout to Functional Characterization Experiment
- Adjusted embedding in schema for Single Cell Units
- Added audit to flag mixed expression measurement methods in Functional Characterization Experiments
- Added disease term name to the Biosample object page
- Added new Annotation types and sub-types to glossary
- Added Donor column to metadata.tsv from file batch downloads
- Updated internal tag links to point to collection pages where appropriate
- Updated search to return collection pages
- Updated colors for Revoked and Content Error statuses
- Added “guide locations” enum to File output_type
- Fixed genome browser bugs affecting chromatin state Annotations
- Updated inconsistent analysis files audit
- Fixed audit error affecting “repeat elements annotation” Files
v117 software version: https://github.com/ENCODE-DCC/encoded/releases/tag/v117.0
All of the source code used for the portal website is open source and available through our repository hosted at GitHub (www.github.com/ENCODE-DCC/)