v116 released!

May 7, 2021 —
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Announcing v116 release of the ENCODE portal, highlighted by the following updates:

Added control_type facet to FCC and Experiment search/matrix pages
Updated ChIP-seq matrix to address loading and speed issues
Allowed submitters to modify mapped_run_type and mapped_read_length properties of Files
Added Multiomics Series objects
Added Disease Series objects
Added legend to genome browser
Added a link to Gene objects from Target pages
Adjusted display of strand specificity metadata on Experiment pages
Reduced strand_specificity requirements to apply only to RNA libraries
Added Manatee Donor object
Modified WGBS audits to exclude RRBS datasets
Added “guide quantifications” and “CRISPR element quantifications” enums to File file_format_type
Added “R2C2 subreads” enum to File output_type
Added “repeat elements annotation” enum to File output_type
Added calculated property usable_fragments to QC metrics
Added calculated property default_analysis to Experiments
Added “ana-conesa” namespace to alias regex
Added audit to flag Analyses with multiple awards or multiple datasets
Changed “analysis_objects” property of Experiments to “analyses”, and added analyses property to all Dataset objects
Added gene search autocompletion to RNA Get UI
Modified default selection of analyses in file gallery menu
Modified examined_loci property of Functional Characterization Experiment to include expression_measurement_method
Linked SingleCellUnits to SingleCellSeries objects
Fixed bug in calculation of Analysis titles
Fixed bugs in detail text for various audits

All of the source code used for the portal website is open source and available through our repository hosted at GitHub (www.github.com/ENCODE-DCC/)