v112 released!

Announcing v112 release of the ENCODE portal, highlighted by the following updates: 

• Added “index reads” to Analysis Step input_file_types
• Added “elements enrichment” to File file_format_type
• Added “stimulation” to Treatment purpose
• Fixed bug affecting downloads of report .tsvs from Cart view
• Changed Experiment Series QC UI to use Analysis objects
• Fixed how Experiment Series objects handle multiple analyses for a dataset
• Added “mixed_biosamples” property to Library
• Modified column fields in for various Series and Dataset objects to use “amount” and “amount_units” properties of Treatments
• Modified NTR biosample audit to prevent propagation of audit from Antibody objects to Experiments
• Added Series search page to navigation toolbar
• Modified series search summaries to include additional metadata
• Modified various Series pages to include additional metadata, adjust tables, and update breadcrumb links
• Created new ChIA-PET Alignment Quality Metric schema
• Fixed bugs preventing download of graphs and made other visual updates
• Added batch download links on Dataset pages
• Added “footprints”, “eQTLs”, “PWMs”, “dsQTLs”, and “curated SNVs” to Annotation annotation_type; “position weight matrix” and “sequence logo” to Document document_type; and “PWMs”, “curated SNVs”, “curated binding sites”, “dsQTLs”, and “eQTLs” to File output_type

v112 software version: https://github.com/ENCODE-DCC/encoded/releases/tag/v112.0

All of the source code used for the portal website is open source and available through our repository hosted at GitHub (www.github.com/ENCODE-DCC/)