v107 released!

Announcing v107 release of the ENCODE portal, highlighted by the following updates: 

• Created new matrix page for ENCORE data
• Fixed bugs on ChIP-seq matrix page
• Added C.elegans and D.melanogaster tabs to ChIP-seq matrix
• Fixed bugs on Mouse development matrix page
• Fixed bug in track visualization code
• Replaced “analyses” property of Experiments with Analysis objects
• Updated association graph to rely on Analysis objects
• Fixed bugs affecting arrows on file association graphs
• Added new badges for matrix pages
• Added “CUT&Tag” assay term name for Experiments
• Added  “life_stage_age” property to Experiments
• Added “CpG coverage quantification”, “methylation estimation”, “genotyping”, and “smoothing” analysis_step_type terms for Analysis Steps
• Added “UV enriched segment quantifications”, “plus strand methylation state at CpG”, “minus strand methylation state at CpG”, “CpG sites coverage”, and “sparse gene count matrix” output_types to Analysis Steps
• Added additional cutadapt specific metrics to Trimming Quality Metrics
• Changed files included in contributing_files property of Experiments
• Fixed bug affecting audits for micro RNA-seq experiments
• Modified audits regarding NSC and RSC quality metrics for ChIP-seq data
• Modified DNase alignment quality metrics to permit negative fourier_transform_eleven values
• Allowed specification of average_fragment_size in place of size_range for Libraries and changed usage of “small RNA-seq” assay title
• Modified Genetic modification schema to permit CRISPR mutagenesis GMs for characterization
• Fixed bugs in Valis genome browser
• Modified QC audits for ATAC-seq data
• Changed display of Factorbook links on Experiment pages
• Created glossary page
• Removed phone number requirement for Lab objects

v107 software version: https://github.com/ENCODE-DCC/encoded/releases/tag/v107.0

All of the source code used for the portal website is open source and available through our repository hosted at GitHub (www.github.com/ENCODE-DCC/)