v106 released!

September 9, 2020 —

Announcing v106 release of the ENCODE portal, highlighted by the following updates: 

  • Updated batch download feature to use new metadata mechanisms
  • Updated UI page for Transgenic Enhancer Experiments
  • Added link to Transgenic Enhancer Experiments in drop down menu
  • Added “assay_title” property to Transgenic Enhancer Experiments
  • Added “unidentified tissue” enum to “tissue_with_enhancer_activity” property of Transgenic Enhancer Experiments
  • Added feature to highlight arrows on association file graphs when clicking nodes
  • Fixed detail text for “term_id not in ontology” audit
  • Replaced the file output_type of “stable peaks” with “pseudo-replicated peaks”
  • Updated audits for missing and non compliant biosample characterizations
  • Updated UI to display new Genetic Modification properties
  • Changed “disease_term_id” property of Biosamples to be an array and accept HP ID terms
  • Added SPRITE-IP assay term name
  • Restricted submission of “target” property of Functional Characterization Experiments to admin only
  • Added grouping of properties reported in Quality Metrics
  • Added audit to flag Analysis Step objects associated with multiple Pipelines

v106 software version: https://github.com/ENCODE-DCC/encoded/releases/tag/v106.0

All of the source code used for the portal website is open source and available through our repository hosted at GitHub (www.github.com/ENCODE-DCC/)